Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGCTGCGGCTGTGAT
((((((((((((.(((.....&))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286506
GeneSymbolRSPH1
Binding site4,20
Score0.846
Seed1
Au0.327
Energy-20.3
Binding len16
Me-5.227
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure