Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGAGGCAGGAGGATTGCTTGAGTCCAGAAAGTGGCAGTTGCAGT
((((((((((.(((....((.&.))....))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286506
GeneSymbolRSPH1
Binding site948,994
Score0.923
Seed1
Au0.426
Energy-17.6
Binding len22
Me-7.731
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure