Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTACGGACTCGCAGTTCCTGGTGCT
..(((((((((((((((((((&)))))))).)).))))))......))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286511
GeneSymbolSLC35B2
Binding site553,581
Score0.821
Seed1
Au0.426
Energy-19.4
Binding len28
Me-4.957
Phylopstem-0.5079040370370372
Phylopflank0.9594207874999998
Longest consecutive pairings8
Position of longest consecutive pairings20
Pairings in 3prime end8
PositionCDS
2D Structure