Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&AAGGCTGCAGTGAGCTA
((..(((((((((((......&)))))))))).)..)).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001364594
GeneSymbolPAM
Binding site3938,3955
Score0.923
Seed0
Au0.515
Energy-19.0
Binding len17
Me-8.76
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings7
Pairings in 3prime end2
Position3UTR
2D Structure