Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTTGTAAGCCAGGC
.((((((.((((((........&)))))).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001286516
GeneSymbolDNAJA3
Binding site1725,1739
Score0.846
Seed1
Au0.426
Energy-18.1
Binding len14
Me-7.075
Phylopstem-1.3938709333333332
Phylopflank-0.524808745
Longest consecutive pairings6
Position of longest consecutive pairings8
Pairings in 3prime end0
Position3UTR
2D Structure