Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGGGGTACCAAGCAGCTGCAC
.((((((((((((.....((.&)).....)))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286516
GeneSymbolDNAJA3
Binding site1556,1578
Score0.846
Seed1
Au0.426
Energy-21.8
Binding len22
Me-5.619
Phylopstem-0.5838665000000001
Phylopflank-0.1990581175
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure