Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCCGCGGCTGCC
..((((((((((.........&.)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286516
GeneSymbolDNAJA3
Binding site59,73
Score0.923
Seed1
Au0.279
Energy-21.3
Binding len12
Me-8.071
Phylopstem1.5207416999999999
Phylopflank0.8978619324999999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end0
Position5UTR
2D Structure