Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAAGGAGCATGTACTGGCCGCAGCA
.....((((((((((((....&.))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286525
GeneSymbolCENPW
Binding site330,356
Score0.846
Seed0
Au0.574
Energy-18.5
Binding len15
Me-13.666
Phylopstem0.4598737692307692
Phylopflank-0.36194000350000005
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure