Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGGCCATAGGAAGAAACATCGGCCTGTGCAACGGGAAGCTGCAAG
((((((((.(.((((((((((&.)))).)))))).)..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286527
GeneSymbolATP2C2
Binding site1896,1945
Score0.923
Seed1
Au0.397
Energy-25.4
Binding len25
Me-7.819
Phylopstem4.9591367272727265
Phylopflank2.5742493627249994
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure