Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCATGGCGGGGGATGTGGGCGGTCGCAGCTGCAC
.(((((((((((((((.....&.))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286537
GeneSymbolC2orf49
Binding site45,80
Score1.0
Seed1
Au0.294
Energy-24.4
Binding len17
Me-3.793
Phylopstem1.9579155146666667
Phylopflank2.0886925685833333
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure