Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGCTGCACCCGGAGCTGCT
..((((((.(((.((((.(((&)))..)))).))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286537
GeneSymbolC2orf49
Binding site92,113
Score0.846
Seed1
Au0.368
Energy-23.2
Binding len21
Me-7.303
Phylopstem4.190136666666667
Phylopflank2.7518432617499995
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure