Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGGTCTAGAGTAGAAGGTGCCAGGTG
(((((((((....(.(((((((&))))))).).......))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001286554
GeneSymbolUSP49
Binding site2411,2437
Score0.846
Seed1
Au0.529
Energy-20.4
Binding len26
Me-13.376
Phylopstem0.19168804444444437
Phylopflank0.5149260725000002
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure