Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGGAGGAGGGTGGGCTGGCCGGGA
...(((.((((((((((((((&))))))).......)))))).).))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001286554
GeneSymbolUSP49
Binding site5879,5906
Score0.846
Seed0
Au0.382
Energy-26.7
Binding len27
Me-8.058
Phylopstem-0.08736206818181817
Phylopflank0.32908273749999994
Longest consecutive pairings7
Position of longest consecutive pairings20
Pairings in 3prime end8
Position3UTR
2D Structure