Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCAGGGACAGCCGCAGATGCT
..(((.((((((((((.....&.)))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286554
GeneSymbolUSP49
Binding site632,655
Score0.846
Seed0
Au0.279
Energy-22.7
Binding len16
Me-6.858
Phylopstem0.44139370000000006
Phylopflank-0.03512912749999997
Longest consecutive pairings10
Position of longest consecutive pairings5
Pairings in 3prime end3
PositionCDS
2D Structure