Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTGCGGCCGGGATCGCGGAAAGTGATGGCTGTC
..(((((((((((((((((((&))))))))))))................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286562
GeneSymbolARMT1
Binding site53,89
Score0.846
Seed1
Au0.353
Energy-21.1
Binding len36
Me-4.957
Phylopstem0.20111440571428565
Phylopflank0.44334075999999994
Longest consecutive pairings12
Position of longest consecutive pairings24
Pairings in 3prime end8
Position5UTR
2D Structure