Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCTGAGCCCAGCTGG
...((((((.((((...((((&))))...)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286562
GeneSymbolARMT1
Binding site1234,1252
Score0.846
Seed0
Au0.456
Energy-20.0
Binding len18
Me-8.726
Phylopstem2.689050316666666
Phylopflank4.369350149999999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure