Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TACTCACCGTGGTTGTT
..(((((((((((.(((....&)))..))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286562
GeneSymbolARMT1
Binding site301,318
Score0.923
Seed1
Au0.618
Energy-17.4
Binding len17
Me-5.814
Phylopstem1.2469009090909091
Phylopflank1.9319977312500005
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure