Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCTGCCGCGGGCC
..((..(((((((.((((((.&)))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286566
GeneSymbolKIAA0513
Binding site5961,5978
Score0.846
Seed0
Au0.353
Energy-21.7
Binding len17
Me-11.834
Phylopstem-0.6291980857142858
Phylopflank-0.66579189625
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure