Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTGGGGACTGCAGCTGTGGG
((((((((((((((.(.((((&)))).).)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286570
GeneSymbolJAML
Binding site6,28
Score0.885
Seed1
Au0.421
Energy-24.6
Binding len22
Me-4.673
Phylopstem-0.35194246428571424
Phylopflank-0.4432682875
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure