Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCCGTGGGCGCAAA
((((..((((((((((.....&))))))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286577
GeneSymbolC2CD3
Binding site241,258
Score1.0
Seed0
Au0.471
Energy-20.8
Binding len17
Me-9.958
Phylopstem-0.56052208
Phylopflank0.13687188499999997
Longest consecutive pairings10
Position of longest consecutive pairings7
Pairings in 3prime end3
PositionCDS
2D Structure