Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCACGAATCTGGTAGCTGCT
..((((((((.(((((.(((.&))).))))...).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286580
GeneSymbolKCTD20
Binding site1005,1027
Score0.962
Seed1
Au0.5
Energy-19.9
Binding len22
Me-7.782
Phylopstem6.0378375
Phylopflank5.120474901249999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure