Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCTGTGAGGTGTGCGGCAGGAGCGACCGTGAGGACAGGCTTTTGCTCTGCGACGGCTGCGAT
(((((((((((((((((((((&)))))....................))))))))........................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286581
GeneSymbolPHRF1
Binding site693,759
Score0.846
Seed1
Au0.382
Energy-21.9
Binding len66
Me-3.938
Phylopstem4.719898333846154
Phylopflank3.114213682500001
Longest consecutive pairings8
Position of longest consecutive pairings33
Pairings in 3prime end8
PositionCDS
2D Structure