Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCTGTGAGGTGTGCGGCAGGAGCGACCGTGAGGACAGGCTTTTGCTCTGCGACGGCTGCGAT
(((((((((((((((((((((&)))))....................))))))))........................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286582
GeneSymbolPHRF1
Binding site690,756
Score0.846
Seed1
Au0.382
Energy-21.9
Binding len66
Me-3.938
Phylopstem4.839121993846154
Phylopflank3.1776323512499993
Longest consecutive pairings8
Position of longest consecutive pairings33
Pairings in 3prime end8
PositionCDS
2D Structure