Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGTTCACAGCAGCTGCAT
.(((((((((.((....((((&))))....)).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286583
GeneSymbolPHRF1
Binding site1334,1355
Score0.923
Seed1
Au0.353
Energy-23.3
Binding len21
Me-8.443
Phylopstem2.112410666666667
Phylopflank2.6970526475000005
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure