Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGAGCCGGAGCCGTAGTCGCAGCCGCAGCCGCAGC
((((.(((((((((((..(((&.)))......))))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286611
GeneSymbolREPS1
Binding site305,343
Score0.846
Seed0
Au0.176
Energy-27.1
Binding len27
Me-8.057
Phylopstem-0.24856373636363632
Phylopflank0.15566932749999998
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end6
Position5UTR
2D Structure