Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTACCCCTGACCCGGAAATGGAGCCTCCACCCAAGCCTCCCCGCAGCTGCT
..((((((((((.....((((&.))))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286613
GeneSymbolMICAL1
Binding site2806,2860
Score0.923
Seed1
Au0.279
Energy-24.5
Binding len18
Me-8.071
Phylopstem3.9441677000000004
Phylopflank3.4235978474999995
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure