Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCTGCCAGCCGGGCCCCGGCTGCAGA
((((((((((((((((((((.&))).))).))))).....))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286626
GeneSymbolRNPS1
Binding site1053,1081
Score0.846
Seed1
Au0.338
Energy-23.1
Binding len28
Me-3.938
Phylopstem4.653728074074075
Phylopflank4.093238200000001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure