Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTCTGGCAACTGTGTTGCAT
.((((((.((((((((.((((&)).)).)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286633
GeneSymbolTRIM40
Binding site1732,1753
Score0.923
Seed1
Au0.485
Energy-19.6
Binding len21
Me-6.107
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure