Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CATTGTCCGTGGCTCTTGGAGTCTCCGTGATGCCAGGC
.((((((((.(.(((.((((((&.)))))).)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001286635
GeneSymbolC6orf89
Binding site1812,1850
Score0.923
Seed1
Au0.574
Energy-20.6
Binding len21
Me-8.616
Phylopstem-0.08806302499999999
Phylopflank0.03602851750000001
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure