Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTTGCATGCATGTGTGAACCAGCTGTGAGCTGCAAG
(((((((((((((((......&.))))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286635
GeneSymbolC6orf89
Binding site1356,1393
Score0.904
Seed1
Au0.397
Energy-21.7
Binding len18
Me-4.171
Phylopstem0.61088325
Phylopflank0.32808256999999996
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure