Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGAAACTATGCCAAACCAAAGAGCAGCTGCAGT
(((((((((((((((((.(((&.))).)))..)))).....)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286638
GeneSymbolZDHHC20
Binding site4246,4282
Score0.923
Seed1
Au0.647
Energy-22.1
Binding len30
Me-3.938
Phylopstem3.3739139708333337
Phylopflank3.2107890462500004
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure