Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTGCTTCCGTGGTCTGCC
..((((((((((..(((((..&)))))..)))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286640
GeneSymbolMON1B
Binding site1546,1565
Score0.923
Seed1
Au0.426
Energy-22.3
Binding len19
Me-7.103
Phylopstem0.16511876363636363
Phylopflank0.17653775124999993
Longest consecutive pairings6
Position of longest consecutive pairings6
Pairings in 3prime end5
Position3UTR
2D Structure