Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TACATCTGCAGCTGACAAT
((((((((((((.((((....&)))).))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286644
GeneSymbolCOP1
Binding site2347,2366
Score1.0
Seed1
Au0.618
Energy-22.4
Binding len19
Me-5.227
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings5
Pairings in 3prime end4
Position3UTR
2D Structure