Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGGTGCCGCAGCTGTT
..(((((((((((.....(((&)))...))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286646
GeneSymbolSLC45A4
Binding site2935,2953
Score0.923
Seed1
Au0.588
Energy-22.6
Binding len18
Me-6.782
Phylopstem-0.9553280909090909
Phylopflank-0.5767303074999999
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure