Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGCTGTTGTAGCTGCT
..((((((((((..(((....&)))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286673
GeneSymbolRGS20
Binding site399,415
Score0.846
Seed1
Au0.485
Energy-17.9
Binding len16
Me-7.103
Phylopstem6.489745339999999
Phylopflank2.993722741249999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure