Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGTAGCACGGAGGAAAAGGCAGTGACGACCGTGCTCTGGGGCTGCGAG
((((((((.(((..(((.(((&.))).))).))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286681
GeneSymbolNPM2
Binding site255,306
Score0.846
Seed1
Au0.382
Energy-23.2
Binding len22
Me-7.14
Phylopstem-0.20938125000000002
Phylopflank0.30426484262500014
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure