Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTATAGTAACCAGAAGGATGCAATACTGGCAGCTGCAGA
((((((((((.((((((....&.)))))...).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286683
GeneSymbolAADAT
Binding site1182,1222
Score0.846
Seed1
Au0.529
Energy-21.5
Binding len22
Me-6.762
Phylopstem4.17468437
Phylopflank4.300361558750001
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure