Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACAAAACCTCAGCCTGTAAA
(((((((((.((((....(((&)))....)))).)))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286686
GeneSymbolCKAP2
Binding site761,784
Score0.923
Seed1
Au0.588
Energy-18.3
Binding len23
Me-6.149
Phylopstem0.8678771000000001
Phylopflank0.46343028750000015
Longest consecutive pairings5
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure