Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCAGACCTTCTCAGAGGTACCTGTATTAATTGAGCTGCAGT
((((((((.((((((..((((&.))))....)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001364708
GeneSymbolSPEM3
Binding site3308,3353
Score0.846
Seed1
Au0.441
Energy-19.9
Binding len24
Me-5.227
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure