Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTACAGTCACCTCATGTTGCAGA
(((((((((.(((((((((((&))))))))...))).)).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286710
GeneSymbolACSL1
Binding site2325,2351
Score1.0
Seed1
Au0.588
Energy-23.1
Binding len26
Me-5.18
Phylopstem4.580503742857142
Phylopflank4.082468743749999
Longest consecutive pairings8
Position of longest consecutive pairings18
Pairings in 3prime end8
Position3UTR
2D Structure