Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATTCTGCAGCTGTCTGCTGCT
..(((((.(((((((((....&.)))))))))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286710
GeneSymbolACSL1
Binding site2538,2559
Score0.846
Seed0
Au0.515
Energy-21.1
Binding len18
Me-7.271
Phylopstem4.637442444444444
Phylopflank4.46662852875
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end4
Position3UTR
2D Structure