Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTGCTGCAAATTCTGCAGCTGTC
..(((((((((((((((((((&))))..)))))...)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286711
GeneSymbolACSL1
Binding site2451,2476
Score0.846
Seed1
Au0.529
Energy-20.5
Binding len25
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure