Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AATCTATGTGTAACCATGTCATTTGAGTTGCAAATTAATTGCCAGGC
.((((((((((.(((((((((.&))))))))))))...........................))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001286730
GeneSymbolSLC44A1
Binding site3685,3732
Score0.923
Seed1
Au0.632
Energy-18.0
Binding len47
Me-7.14
Phylopstem1.5887242972972975
Phylopflank2.2501981100000004
Longest consecutive pairings12
Position of longest consecutive pairings35
Pairings in 3prime end7
Position3UTR
2D Structure