Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGGAGGACCGTAGCTGCAC
.(((((((((((((.(..(((&)))..).))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286730
GeneSymbolSLC44A1
Binding site277,298
Score0.923
Seed1
Au0.441
Energy-28.3
Binding len21
Me-4.529
Phylopstem4.6593448461538465
Phylopflank3.82190268375
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure