Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTATATAGATGGCTGCT
..((((((.....(((((((.&))))))).....)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286746
GeneSymbolBORA
Binding site1307,1326
Score0.846
Seed1
Au0.603
Energy-17.5
Binding len19
Me-14.717
Phylopstem3.048794
Phylopflank1.8345697499999998
Longest consecutive pairings7
Position of longest consecutive pairings12
Pairings in 3prime end7
PositionCDS
2D Structure