Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGTGTCCCTGAGTCTCCTTTCTGAGTGCAAGCTGCAC
.((((((((((.(((.((((.&.))))..))).)))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286748
GeneSymbolMRPS27
Binding site2050,2091
Score0.846
Seed1
Au0.471
Energy-20.1
Binding len23
Me-7.373
Phylopstem3.0525673636363635
Phylopflank3.1425558565
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure