Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTACTCTGCAGTC
.....(((((((..(((((((&))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286754
GeneSymbolSYNPO2
Binding site2014,2030
Score0.846
Seed0
Au0.426
Energy-19.8
Binding len16
Me-15.812
Phylopstem2.7736514285714287
Phylopflank1.546827635
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end7
PositionCDS
2D Structure