Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGGCCTTGAGGCTGGGTCC
.(((((...(((((((((...&)))....))))))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001286761
GeneSymbolRUBCNL
Binding site3557,3576
Score0.846
Seed0
Au0.485
Energy-20.8
Binding len19
Me-8.707
Phylopstem-0.683870153846154
Phylopflank0.20239025749999995
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure