Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCCCAGGATGTGCAGCAACAGCCGCAGGACTTGCAAT
((((((((((((((((.....&.))))))))))...)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286762
GeneSymbolRUBCNL
Binding site404,443
Score0.923
Seed1
Au0.382
Energy-22.6
Binding len21
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings10
Pairings in 3prime end3
PositionCDS
2D Structure