Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTCAAGAGCAGCTGCT
..((((((((..(((......&.)))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286776
GeneSymbolTEX30
Binding site400,417
Score0.846
Seed1
Au0.529
Energy-18.8
Binding len15
Me-11.362
Phylopstem1.29755425
Phylopflank0.8425557012500002
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure